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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927522.1_cds_XP_016475290.1_67239
CDS Infomation

[gene=LOC107796977] [db_xref=GeneID:107796977] [protein=pollen-specific leucine-rich repeat extensin-like protein 4] [partial=3'] [protein_id=XP_016475290.1] [location=32504..>33772] [gbkey=CDS]
Sequence

ATGGCTAATCCTCCAAACATAAAGGCCTTAGGTTGCTTTCTTCTCCTCAATCTTGTTTCT
TTTTCATCCTTTTCTTTTGCATTAACTGATAATGAAGCCGCTCTCATCGCTCGTCGCCAG
CTTACCGCTGGTACTGGTGATCTTCCAAATCCAGTTGAATATGAAAAGAACATTAAGTTG
ACATTTGCAAATGCTAGGTTAAAGAAAGCTTACATTGCTCTTCAAGCTTGGAAAAAAGCT
ATTTACTCTGATCCATCAAATTTCACTAGTAATTGGGAAGGTCCTGATGTTTGTGCATAT
AATGGTGTTTTTTGTGATAATGCATTAGATGATCCCAACATCTCTGTTGTTGCTGGTATT
GATCTTAATCATGCAGACATCGCGGGGCACCTCCCTGTAGAGCTCGGGTTCCTATCCGAT
GTTAGTCTTATTCATATTAATTCTAATCGATTCTGTGGAATCGTCCCTAAGAGTGTTTCA
AATCTTAAACTTTTAGATGAGATTGATTTCAGCAACAACCGTTTCGTGGGGCCATTCCCT
AAGGTTGTGCTGGAGTTGCCAAACCTTAAATACCTTGATCTTAGGTACAATGATTTTGAA
GGATCAGTGCCTTCTGAACTATTTGATAAGAGTCTTGATGCTATTTTCCTAAACAATAAT
CGTTTCCATTCCACCATTCCTCCAAATATTGGCAATTCCAATGCCTCAGTGGTGGTTTTG
GCTAACAATAAATTCCATGGTTGCATCCCTCATAGTATTGGCAAAATGGAAAACACATTA
GATGAGCTTGTTTTCACCAACAACAATCTCTCTGGTTGTGTTACAGACGAAATCACTAAG
CTCAAGAGCTTAACGGTTTTTGACATTAGCAGAAATAAGTTTGTTGGATCCTTGCCTCAG
GGTTTGAAATTCATGCAGAAAGTGCAAGTACTTGATATTGCATCAAACATGTTTATAGGA
GAAGTTCCAGAGGCTATTTGCACCTTACCAAATTTGGCCAATTTCACATTCTCTTACAAT
TATTTTGATGCCTTGGACAAAGCTTGTGCACCACCACTTAAGAAAAATCTTGTGGTAGAA
GATAAGGAAAATTGTTTAGGAGGAAGACCAGACCAGAGAAAAGAGAGAGATTGTCAATCT
GTTTTGAGCAAACCTGTGGATTGCAGTAAAGATAAATGTAGAGCTAACAAAGAAGGACCA
GCACCAAAGGAACCAAATCCCCCTATGCCACCCAAAAGAACTCCTTCAACCCCAAAACCA
CCTAAGTCT

Peptide Sequence

PEP ID

XP_016475290.1
PEP Infomation

PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 4, partial [Nicotiana tabacum]
Sequence

MANPPNIKALGCFLLLNLVSFSSFSFALTDNEAALIARRQLTAGTGDLPNPVEYEKNIKL
TFANARLKKAYIALQAWKKAIYSDPSNFTSNWEGPDVCAYNGVFCDNALDDPNISVVAGI
DLNHADIAGHLPVELGFLSDVSLIHINSNRFCGIVPKSVSNLKLLDEIDFSNNRFVGPFP
KVVLELPNLKYLDLRYNDFEGSVPSELFDKSLDAIFLNNNRFHSTIPPNIGNSNASVVVL
ANNKFHGCIPHSIGKMENTLDELVFTNNNLSGCVTDEITKLKSLTVFDISRNKFVGSLPQ
GLKFMQKVQVLDIASNMFIGEVPEAICTLPNLANFTFSYNYFDALDKACAPPLKKNLVVE
DKENCLGGRPDQRKERDCQSVLSKPVDCSKDKCRANKEGPAPKEPNPPMPPKRTPSTPKP
PKS

Transcript Sequence

Gene sequence data has not been registered.